|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.5G389500.3.p |
Common Name | LOC101771249, SETIT_000955mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
bZIP |
Protein Properties |
Length: 523aa MW: 56261.2 Da PI: 6.3786 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G389500.3.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 37.3 | 5.8e-12 | 212 | 242 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33
+k err+++NReAAr+sR+RKka++++Le+
Seita.5G389500.3.p 212 HDKTERRLAQNREAARKSRLRKKAYVQQLET 242
589**************************97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 523 aa
Download sequence Send
to blast |
MVHGEESSWR MERAALPLNQ ALAYGVQAHA AAAAAPPSCF LDFQPAAAAA AYFGFGELEE 60 ALIHGGGGAS ANAGGGVDPG VIIKSDAPAQ TKPAAAGYLA GAGGGRPPTL EIFPSWPMRH 120 QQQLHSGNSQ SVGSTTDSSS AQNTMSQMEL VSPASPAPRQ EVMMVTTDDY SYKPGLAAAP 180 AAAPAPAPPS FQQHHPALPL HLHGGGGGGG DHDKTERRLA QNREAARKSR LRKKAYVQQL 240 ETSRIRLQQV EHELQRARSQ GLFVGGCSAA GDMSSGAAAF DMEYARWLDD DGKRLAELRG 300 GLQAHLDGNL GLIVEECVQH YDELFQLKAA LAHEDVFHLL TGGWATPAER CFFWMGGFRP 360 SELLKILIPQ LDPLTEQQLL GICNLQQSSE QAEEALAQGL HQLHQSLADT VAAGTLNDGA 420 AAPNYMSLMA VALEKLASLE SFYQQADNLR QQTLHQMRRI LTTRQAARCF LSIGEYYRRL 480 RALSNLWASR PRENFIGTES LSPTATELQV MHQQQQNQFS GF*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |