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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.5G356200.1.p |
Common Name | LOC101780708, SETIT_002173mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 334aa MW: 36026.4 Da PI: 9.1579 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G356200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 48.7 | 1.6e-15 | 263 | 311 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
+r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + +el+k
Seita.5G356200.1.p 263 RRQKRMIKNRESAARSRARKQAYTNELENKVSLLEEENERLK-RQKELEK 311
79***************************************9.5566655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MGSQTMASKA GGGGGGGGGG GGAGAAQRGQ MQNLSRQGSL YNLTLDEVQS HLGEPLHSMN 60 LDELLKSVFP DGLEHDGGTT SQYEQTSGLL RQGSITMPPE LSKKTVDEVW KGIQDAPKRN 120 VTEGGRRRRE RQPTLGEMTL EDFLVKAGVV TQGYLKDLND VGNVEQVGSA GVSGLTAGAQ 180 WLDRYQQQIT AIEPHQHGQH GVPGAYMPSQ LALQPLNVGP GAILESYSDG HITSPMMGAL 240 SDSPTPGRKR GAPGDVADKL MERRQKRMIK NRESAARSRA RKQAYTNELE NKVSLLEEEN 300 ERLKRQKELE KILFSAPLPE PKYQLRRTGS ATF*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 124 | 131 | GRRRRERQ |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |