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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.5G353800.3.p |
Common Name | LOC101771904, SETIT_001292mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 474aa MW: 51362.5 Da PI: 6.6162 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G353800.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 29.6 | 1.5e-09 | 188 | 228 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka+i++Le +L++ ++L
Seita.5G353800.3.p 188 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 228
7889************************9777777666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009410 | Biological Process | response to xenobiotic stimulus |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MESRRGGSAA AAAAAAAEDA GGAMPSFGPP QHSIHTDMNS MQPSRVADFG ALAQSAGFRI 60 EDLANINTGT LFNLKTNTHT ISNNPLQFGN YGKPISPSHI NTTTAATAAA RIDPQSLEQQ 120 TGAQPNLVAL PTGNIENWGE SAMADSPMTD TSTDPDTDER NQMFEQGLVA GPTASDSSDK 180 SRDKLDQKTL RRLAQNREAA RKSRLRKKAY IQNLESSRLK LTQLEQELQR ARQQGIFIST 240 SGDQPQSTSG NGALAFDMEY ARWLEEHNKH VNELRAAVNA HAGDNDLRGI VDSIMAHYDE 300 IFRLKGVAAK ADVFHVLSGM WKTPAERCFM WLGGFRSSEL LKLLAGQLEP LTDQQLVGIS 360 NLQQSSQQAE DALSQGMEAL QQSLAETLAS GSLGPAGSSG NVASYMGQMA MAMGKLGTLE 420 NFLRQADNLR LQTLQQMQRI LTTRQSARAL LAISDYFSRL RALSSLWLAR PRE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT034456 | 0.0 | BT034456.1 Zea mays full-length cDNA clone ZM_BFc0173A06 mRNA, complete cds. |