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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.5G233900.1.p |
Common Name | LOC101756106, SETIT_002019mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 356aa MW: 38198.3 Da PI: 6.9652 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G233900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.2 | 3e-32 | 205 | 262 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+H+h+
Seita.5G233900.1.p 205 EDGYRWRKYGQKAVKNSPYPRSYYRCTTPKCGVKKRVERSYQDPSTVITTYEGQHTHH 262
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MSSGGGGGGG GGDHHGVYHQ HGHGGHLARA DGAEYVFGNS DMESFFFNQP ASGGVGGGSR 60 AGADELMPPY TNITDYLQGF LDPSGLARHL DAPCPAEDGQ VKHELSLDVM SHDSQGTSGA 120 AGEGAVALLT PNSSVSLSSS EREGEGQPRR CKKKAEDEVA AEGDEKDQED GENSTKANKP 180 KKKAEKRQRQ PRVAFLTKSE VDHLEDGYRW RKYGQKAVKN SPYPRSYYRC TTPKCGVKKR 240 VERSYQDPST VITTYEGQHT HHSPASLRAG GAHLFMSGAH GLPPHLMPSA GGFRPDLMSM 300 MHPIHTGANP NMFLPSMPPP QMPTPSPPPP PLQQHHFSDY ALLQDLFPST MPNNP*
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