PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.5G148300.1.p
Common NameLOC101770717, SETIT_002311mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 315aa    MW: 34131 Da    PI: 6.878
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.5G148300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-11181226550
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Seita.5G148300.1.p 181 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 226
                         8999*********************************999987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.6E-14177241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.76179235IPR004827Basic-leucine zipper domain
PfamPF001705.9E-10181230IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.7E-14181235No hitNo description
SuperFamilySSF579591.69E-11181235No hitNo description
CDDcd147032.83E-24182232No hitNo description
PROSITE patternPS000360184199IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MAQLPPKIPT MAPAWPEFGG GHHHHAHHHH QRSPSVGTFL AAPMPPLPPP QQQHQQPSWV  60
DEFLDFSAAK RGAHRRSVSD SVAFLEPGPD DGNAGVGAHD FDRLDDDQLL SMFSDDMPPP  120
PSQQQAAPAP APVASSSSPS DHNSINDEKT DRGETEEAQS KCHGDDAAPG QPASAAAVDP  180
KRVKRILANR QSAQRSRVRK LQYISELERS VTSLQTEVSA LSPRVAFLDH QRSLLTLGNS  240
HLKQRITALA QDKIFKDAHQ EALKKEIERL RQIYHQQSLK KAESPPAPDA APIRSDKDLI  300
ASEGTAAPAP CPPS*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.5G148300.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0612660.0BT061266.1 Zea mays full-length cDNA clone ZM_BFb0128B20 mRNA, complete cds.
GenBankKJ7275570.0KJ727557.1 Zea mays clone pUT5417 bZIP transcription factor (bZIP117) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968609.10.0basic leucine zipper 2
SwissprotQ5QNI51e-112BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLK3XK880.0K3XK88_SETIT; Uncharacterized protein
STRINGSi002311m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-92bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]