|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.5G148300.1.p |
Common Name | LOC101770717, SETIT_002311mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
bZIP |
Protein Properties |
Length: 315aa MW: 34131 Da PI: 6.878 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G148300.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.8 | 3.5e-11 | 181 | 226 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++
Seita.5G148300.1.p 181 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 226
8999*********************************999987765 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MAQLPPKIPT MAPAWPEFGG GHHHHAHHHH QRSPSVGTFL AAPMPPLPPP QQQHQQPSWV 60 DEFLDFSAAK RGAHRRSVSD SVAFLEPGPD DGNAGVGAHD FDRLDDDQLL SMFSDDMPPP 120 PSQQQAAPAP APVASSSSPS DHNSINDEKT DRGETEEAQS KCHGDDAAPG QPASAAAVDP 180 KRVKRILANR QSAQRSRVRK LQYISELERS VTSLQTEVSA LSPRVAFLDH QRSLLTLGNS 240 HLKQRITALA QDKIFKDAHQ EALKKEIERL RQIYHQQSLK KAESPPAPDA APIRSDKDLI 300 ASEGTAAPAP CPPS*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription regulator. {ECO:0000250}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT061266 | 0.0 | BT061266.1 Zea mays full-length cDNA clone ZM_BFb0128B20 mRNA, complete cds. |
GenBank | KJ727557 | 0.0 | KJ727557.1 Zea mays clone pUT5417 bZIP transcription factor (bZIP117) mRNA, partial cds. |