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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.5G136300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Dof |
Protein Properties |
Length: 245aa MW: 24557.1 Da PI: 9.3585 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G136300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 119.9 | 9.4e-38 | 49 | 105 | 3 | 59 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
+ l+cprC+s ntkfCyynny+lsqPr+fC+aCrryWt+GGalrnvPvGgg+rk
Seita.5G136300.1.p 49 PEGLPCPRCESVNTKFCYYNNYNLSQPRHFCRACRRYWTRGGALRNVPVGGGTRKAT 105
57899*************************************************976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MVSCAASSPS SAADMEAGQA ADGGALAVVA SVAAATGGRP GVAGGGREPE GLPCPRCESV 60 NTKFCYYNNY NLSQPRHFCR ACRRYWTRGG ALRNVPVGGG TRKATPATRR KRTAGGTPPA 120 PAPAPLVAAL PPLTMSGPHG ALLRQYGGLP FPAPALASPL AAVDPDRRLL DLGGSFSSLI 180 AAAPPLDVGA HFSAGFLVGG LAPALAHSPA AAAALPPPPP PPQQVPQALP EGLIWSMGWP 240 DLSI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT061950 | 6e-87 | BT061950.2 Zea mays full-length cDNA clone ZM_BFb0200H06 mRNA, complete cds. |
GenBank | KJ727013 | 6e-87 | KJ727013.1 Zea mays clone pUT3994 C2C2-DOF transcription factor (DOF7) mRNA, partial cds. |