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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.5G124900.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
BES1 |
| Protein Properties |
Length: 171aa MW: 18479.4 Da PI: 9.2733 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.5G124900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 133.1 | 3.1e-41 | 44 | 157 | 2 | 116 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92
+s r+pt +ErEnn++RERrRR++aa+iyaGLRa+++y lpk+aD+n+Vl+ALc+eAG+ v+d+G++ r + p a+ +s++ ++ s
Seita.5G124900.1.p 44 TSLRHPTPRERENNRQRERRRRQVAARIYAGLRAHAGYTLPKHADQNDVLRALCAEAGYHVDDGGNVTRLQGVPD-GAAGPSCSSDHQKPS 133
789******************************************************************666676.566666666666666 PP
DUF822 93 slqsslkssalaspvesysaspks 116
s + ++++ +l+ p ++++ +++
Seita.5G124900.1.p 134 SHSGATEAATLQQPEQQQQLEEET 157
666677888888888887766554 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MEVGAGREEG EAAAAPVAGR RGCIRSTQGP WTVRRRGRGG GLTTSLRHPT PRERENNRQR 60
ERRRRQVAAR IYAGLRAHAG YTLPKHADQN DVLRALCAEA GYHVDDGGNV TRLQGVPDGA 120
AGPSCSSDHQ KPSSHSGATE AATLQQPEQQ QQLEEETKLS LELTLSFAYM *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 4e-11 | 18 | 112 | 343 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 4e-11 | 18 | 112 | 343 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 4e-11 | 18 | 112 | 343 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 4e-11 | 18 | 112 | 343 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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