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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.5G104900.1.p |
Common Name | SETIT_003867mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 171aa MW: 18639.9 Da PI: 4.925 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G104900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 35.9 | 1.9e-11 | 35 | 81 | 5 | 55 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
GV++ + +grWvAeI+ p + +l +f+t e+Aa+a+ a +++g
Seita.5G104900.1.p 35 GVWRVP-WGRWVAEICNP-----HlaVCKWLSTFDTTEDAARAYNVATVEFRG 81
998888.********998.....778******************888766665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 171 aa
Download sequence Send
to blast |
MPHAVRTGVP AATASSSLRQ GPAVVAAEWE SESIGVWRVP WGRWVAEICN PHLAVCKWLS 60 TFDTTEDAAR AYNVATVEFR GCCAKLNFPD DAALVLTSTY QHHHHLPQPL LESLHETCGS 120 NASSSVDVAL VVAAPTGQHD TRPVPKEQDI WDTLNEFMMM DDGSFWSPMP *
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