|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.5G038900.1.p |
Common Name | LOC101770845, SETIT_002195mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
bZIP |
Protein Properties |
Length: 331aa MW: 36678.2 Da PI: 7.7986 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.5G038900.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.9 | 2.9e-10 | 44 | 86 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
+ k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L
Seita.5G038900.1.p 44 DQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86
56889*************************9877777766555 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009410 | Biological Process | response to xenobiotic stimulus |
GO:0009627 | Biological Process | systemic acquired resistance |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MADVSPRTET STDDTDDNHG LEPGPGALVA ASDSSDRSKD KHEDQKTLRR LAQNREAARK 60 SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSSV DQSHSMSGNG ALAFDMEYAR 120 WLEEHNRQIS ELRAGVTAHA SDSDLRSVVD KIMSHYDEIF RLKGNAAKAD VFHVLSGMWK 180 TPAERCFLWL GGFRPSEVLK LLSTQLEPLT EQQLSGIGNL QQSSQQAEDA LSQGMEALQQ 240 SLAETLAGSL SSSGSTGNVA NYMGQMAMAM GKLGTLENFL RQADNLRLQT LQQMQRILTT 300 RQAARALLVI SDYSSRLRAL SSLWLARPKE *
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT036137 | 0.0 | BT036137.1 Zea mays full-length cDNA clone ZM_BFb0097M11 mRNA, complete cds. |