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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Seita.5G003100.1.p |
| Common Name | LOC101780416, SETIT_001336mg |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
G2-like |
| Protein Properties |
Length: 466aa MW: 49452.1 Da PI: 6.398 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.5G003100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 89.1 | 3.9e-28 | 181 | 235 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k +++WtpeLH+rFv+aveqL G++kA+P++ile+m+++gLt+++++SHLQkYR++
Seita.5G003100.1.p 181 KVKVDWTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIEGLTRHNIASHLQKYRSH 235
5689*****************.********************************86 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MLEVSSLRSP SKAADQRGFV GDHVGFPTSA GTDDFMVDDN LLDYIDFSSC CDMPFFDADG 60
DILPDLEVDP TESLLAEFSS PETSPAAADG GGGAEAKPPD EKQEQVAAKT AAAEETKADD 120
DEKAAAGGVV VTRKRNGDEV TTTEEDSAGA GAGSDTKSSA AAGGHSKKKA SAGKDSNGKR 180
KVKVDWTPEL HRRFVQAVEQ LGIDKAVPSR ILEIMGIEGL TRHNIASHLQ KYRSHRKHLM 240
AREAEAATWA QKRQLYAAAP VARKVEAAAA AGPPWVVPTI GFPPPPPPAM APPPPPFCRP 300
LHVWGHPPTA AVEAPATMLP VWPRHLAPPR PWVDPGYWHQ QYNAGRTKWA PPQAAAAVTQ 360
GTPCVPPPPA MVQLPRFPHP MYSRPPVMVP PPPPPPTTTT TKLAELQLQL DAHPSKESID 420
AAIGDVLVKP WLPLPLGLKP PSLDSVMSEL HKQGIPKIPP ASSTG*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional activator that promotes chloroplast development. Acts as an activator of nuclear photosynthetic genes involved in chlorophyll biosynthesis, light harvesting, and electron transport (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. {ECO:0000269|PubMed:11340194}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF318579 | 1e-100 | AF318579.1 Zea mays putative transcription factor GOLDEN 2 mRNA, complete cds. |
| GenBank | BT062838 | 1e-100 | BT062838.1 Zea mays full-length cDNA clone ZM_BFb0374G22 mRNA, complete cds. |
| GenBank | EU956792 | 1e-100 | EU956792.1 Zea mays clone 1574106 transcription factor ZmGLK1 mRNA, complete cds. |
| GenBank | KJ727689 | 1e-100 | KJ727689.1 Zea mays clone pUT5628 G2-like transcription factor (GLK13) mRNA, partial cds. |
