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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.5G001200.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
Nin-like |
| Protein Properties |
Length: 324aa MW: 34586.8 Da PI: 10.0188 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.5G001200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 70 | 3.3e-22 | 60 | 107 | 4 | 51 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51
++s e++sk Fslpi++AA+ Lgv+++vLKriCR +GI RWP+Rk+ s
Seita.5G001200.1.p 60 SLSYEEISKLFSLPIAEAASILGVGTSVLKRICRTHGIVRWPYRKLVS 107
6899*****************************************976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MKNGNQTRNH HRAGRIRAAA VLLRRRRLLF DSPLQITAEQ RSGGMASDAQ AQQPKPTRVS 60
LSYEEISKLF SLPIAEAASI LGVGTSVLKR ICRTHGIVRW PYRKLVSAKT GDDTKGPERE 120
KAKELPELSK IAKQKASNSS ASPIVSSTTS QGAAKSQQGS SKAGQVSVSP PAGNQNMSPS 180
LAHGSQAKAI PSYMDDFKYG FPSSGLSCGT MKWWGGSSDA DCAPTKDGSR EAHGEASKGM 240
TEDDELDWGA DEAETEADGA VTAEASAQLC SLRRKAVDDG RKLLNGDTRR GQEFSRLNKR 300
QKLALAQVFG ASLPDVVLLV FSE*
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