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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Seita.4G179900.1.p |
| Common Name | LOC101756487 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
BES1 |
| Protein Properties |
Length: 357aa MW: 37607.5 Da PI: 8.3992 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.4G179900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 209.8 | 7.4e-65 | 12 | 160 | 2 | 148 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasasp 90
g++r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++ +g+sas sp
Seita.4G179900.1.p 12 GGTRVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPTaaERHDPIGRSASPSP 102
789************************************************************************9999************ PP
DUF822 91 esslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148
+ss+q +sp++sy++sp+sssfps+ s+++i+l + +sl+p+l++ls++ss
Seita.4G179900.1.p 103 CSSYQ--------PSPRASYNPSPASSSFPSSGSSSHITLGGNnfiggvegSSLIPWLKNLSSSSS 160
*****........9************************9998899*****9*********998655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 357 aa
Download sequence Send
to blast |
MTSGAGGGGG LGGTRVPTWR ERENNRRRER RRRAIAAKIF AGLRAYGNYN LPKHCDNNEV 60
LKALCNEAGW TVEPDGTTYR KGCKPTAAER HDPIGRSASP SPCSSYQPSP RASYNPSPAS 120
SSFPSSGSSS HITLGGNNFI GGVEGSSLIP WLKNLSSSSS IASSSKFPQL HHLYFNGGSI 180
SAPVTPPSSS PTRTPRIKTD WENPSVQPPW AGCGSNYASL PNSQPPSPGH QVAPDPTWLS 240
GFRISSAGPS SPTYSLVAPN PFGIFKETVA STSRMCTPGQ SGTCSPVMGG VPIHHDVQMV 300
DGTPDDFAFG SSSNGNNQSP GLVKAWEGER IHEECASDEH ELELTLGSSK TRADPS*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 4e-24 | 15 | 89 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 4e-24 | 15 | 89 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 4e-24 | 15 | 89 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 4e-24 | 15 | 89 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
