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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.4G050700.1.p |
Common Name | LOC101785369, SETIT_006013mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ARR-B |
Protein Properties |
Length: 667aa MW: 72711.5 Da PI: 6.5801 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.4G050700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 90.1 | 2e-28 | 218 | 271 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
Seita.4G050700.1.p 218 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 271
79*******************.********************************8 PP
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2 | Response_reg | 75.7 | 1.7e-25 | 29 | 137 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89
vl vdD+p+ +++l+++l++ +y +v+++ ++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ +ge + + +
Seita.4G050700.1.p 29 VLAVDDDPVCLKVLETLLRRCHY-HVTTTNQAITALKLLRENRdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVMKG 117
799********************.***************99999********************87754.558****************** PP
HHTTESEEEESS--HHHHHH CS
Response_reg 90 lkaGakdflsKpfdpeelvk 109
+ Ga d+l Kp+ +eel++
Seita.4G050700.1.p 118 ITHGACDYLLKPVRIEELRN 137
******************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0009736 | Biological Process | cytokinin-activated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 667 aa
Download sequence Send
to blast |
MLLGAARMEE KKGLMMGRER DRFPVGMRVL AVDDDPVCLK VLETLLRRCH YHVTTTNQAI 60 TALKLLRENR DMFDLVISDV HMPDMDGFKL LELVGLEMDL PVIMLSVNGE TKSVMKGITH 120 GACDYLLKPV RIEELRNIWQ HVVRRKFSKR ERSNLEIYKD FNKPPSADSC HGHSQIVGGA 180 SDQSGRICKK RKEMHSDEED DGEENDLQEG DEPSAAKKPR VVWSVELHRK FVAAVNQLGI 240 DKAVPKRILE LMNVEKLTRE NVASHLQKYR LYLKRLSAVA SQQASIVAAF GGRDPSFLHM 300 GAFEGIQSYQ PFVPSAALSS FNPHGLLTGA SAATFGVQEL APAMTVQTAT NNGIISHCGS 360 DGSKFQYVGL QENQHANLAQ GSTTSLGLPQ LEQKWIHQEN NDLSTVFSGS ALANSLSGAL 420 QRVTSSSLPP QELLECTQAK LSIQTSMPMP SMNSELVERT IGISCNLQDS SVSHQGALPI 480 NEGFSADKLQ LHDPFDGTSG TKFSVTMPVC PSGSLTATNN TKSGASSSCG TVLLAPDTGR 540 HSNYMQFGGA SNSRREMDGM KQDHLQNQGL SIGGFSHDFG ACMTQQTNAS MLPLTPEVKI 600 HSLTSEDKLK QKNVCDFGIP KLHGGVSSTS CNFDGLLSSM IKAEKDDFSF TDNDLGCDFF 660 PLGACI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins (By similarity). Functions as a response regulator in response to cytokinins (PubMed:22383541). {ECO:0000250|UniProtKB:Q940D0, ECO:0000269|PubMed:22383541}. |