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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.4G039600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 192aa MW: 19946.2 Da PI: 4.9621 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.4G039600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.8 | 5.6e-18 | 16 | 66 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+ykGVr++k +grW++eIr p + + r++lg+++ +e+Aa+a +aa ++l+g+
Seita.4G039600.1.p 16 KYKGVRRRK-WGRWASEIRLP---N-CrDRIWLGSYDAPEKAARAFDAAYLCLRGP 66
8*****998.**********8...3.45*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 192 aa
Download sequence Send
to blast |
MQPNAAAAAS PSGERKYKGV RRRKWGRWAS EIRLPNCRDR IWLGSYDAPE KAARAFDAAY 60 LCLRGPGGAD GLNFPGSPPG VRRTSDPNEV YAAAVSHADP AAADVDPWDA IQPLPEPTLQ 120 AHGDVAPMEP APAPAAPPAP LQLLADLPPL FSPTEVGSHA YLLPASPTAA DANTMEENGS 180 GSGSGSGLWS F*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |