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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Seita.3G384300.1.p |
| Common Name | SETIT_024270mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
BES1 |
| Protein Properties |
Length: 150aa MW: 16333.4 Da PI: 11.2812 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.3G384300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 124.2 | 1.6e-38 | 50 | 121 | 3 | 74 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74
s r+p++ ErEnn+rRERrRR ++++iy+ LRa+Gny lp ++nneVlkA creAGwvve+DGttyr+ +
Seita.3G384300.1.p 50 SARTPSQVERENNRRRERRRRLVSSRIYTALRAEGNYTLPRNCNNNEVLKAVCREAGWVVEPDGTTYRRAHE 121
679*****************************************************************8765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MIGGGGMVAA GAGDAGGSGG RDHDKGKGIV LGYRYGSARS RAKGRARNLS ARTPSQVERE 60
NNRRRERRRR LVSSRIYTAL RAEGNYTLPR NCNNNEVLKA VCREAGWVVE PDGTTYRRAH 120
EASLLPPVHS CVLCWRGIET LQGGAWQRN*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 1e-17 | 72 | 119 | 392 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 1e-17 | 72 | 119 | 392 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 1e-17 | 72 | 119 | 392 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 1e-17 | 72 | 119 | 392 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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