 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Seita.3G376700.1.p |
| Common Name | LOC101761071, SETIT_022461mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
WRKY |
| Protein Properties |
Length: 359aa MW: 38435.7 Da PI: 10.6794 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.3G376700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.4 | 2.2e-31 | 292 | 349 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+
Seita.3G376700.1.p 292 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEGEHNHT 349
9*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MEEVEVANRA AVESCHRVLS LLSQSQQQDP ALLKSIASET GEACAKFRKV TALLANGGSS 60
GHARGRFYRR GRPSGFLTLK GILGSSSDTP SELMPSAAAA APSPSTSYAQ LRARIGGVPD 120
PRGLDLASSS SKSGAHPYGA PKMVQPLSVQ FQIGNVAHRY PFHQQPSRQK LQAEMFKRSN 180
SGISLKFDSP SPSGGAGTMS SARSFMSSLS MDGSVASLDG KRPFHLVGAP VASDPADAHR 240
APKRRCMGRG QDGTGKCATT GRCHCSKRRK LRIKRSIKVP AISNKIADIP PDEYSWRKYG 300
QKPIKGSPHP RGYYKCSSVR GCPARKHVER CVDDPAMLIV TYEGEHNHTR LPAQSAQT*
|
