|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.3G335400.1.p |
Common Name | LOC101769858, SETIT_023541mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
bZIP |
Protein Properties |
Length: 150aa MW: 16621.6 Da PI: 7.7886 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.3G335400.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 49.7 | 8e-16 | 23 | 82 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+re+r+ +NRe+ArrsR+RK++ ++eL ++v+ L+aeN + + ++ + ++a++++e+
Seita.3G335400.1.p 23 HRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQAENARVAARAADIASQYARVEQEN 82
58*****************************************************99998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006971 | Biological Process | hypotonic response |
GO:0009267 | Biological Process | cellular response to starvation |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000693 | Biological Process | positive regulation of seed maturation |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MSSSSLSPAG RTSGSDGDSA DTHRREKRRL SNRESARRSR LRKQQHLDEL VQEVARLQAE 60 NARVAARAAD IASQYARVEQ ENTVLRARAA ELGDRLRSVN EVLRVVEEFS GVAMDIQEEM 120 PADDPLLRPW QLPYPAAAMP IGGAHMLQY*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 36 | 42 | RRSRLRK |
2 | 36 | 43 | RRSRLRKQ |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | May contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT034289 | 1e-177 | BT034289.1 Zea mays full-length cDNA clone ZM_BFc0009B07 mRNA, complete cds. |
GenBank | BT088408 | 1e-177 | BT088408.1 Zea mays full-length cDNA clone ZM_BFc0179N23 mRNA, complete cds. |
GenBank | EU964736 | 1e-177 | EU964736.1 Zea mays clone 281235 ocs element-binding factor 1 mRNA, complete cds. |