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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.3G327800.1.p |
Common Name | SETIT_022683mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Dof |
Protein Properties |
Length: 338aa MW: 34168.2 Da PI: 8.8753 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.3G327800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 120.9 | 4.7e-38 | 106 | 163 | 5 | 62 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+l+cprCdstntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+n k+s
Seita.3G327800.1.p 106 TLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRS 163
679***************************************************9886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MVFSSLPIFL DPPNWGQMQM QQQQPPLQCL LGGGGGGSDH HHLMPPPSGL APLPGGPADT 60 AASAPAGGGS STSMQAAAGA AAQPRPVVSM AERARLARVP LPEPGTLRCP RCDSTNTKFC 120 YFNNYSLSQP RHFCKACRRY WTRGGALRNV PVGGGCRRNT KRSSKKSSRG GGAGATAATS 180 SSSTTSTSTT ATTTTATTSA AMAAAEAIAS MQAQLPHLGL PPAAAAAALE ASLEGYHHYL 240 PLQMQPQFLQ QAGLHGYHFA DDGSGVLADG FPRGVVASGL LAQLAAVKME EHGGGGGGGG 300 AVAAHEQPYW AGSNGGGSGW PAEFLSGFSS SSSGNVL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC582419 | 0.0 | KC582419.1 Sorghum bicolor dof28 protein (dof28) gene, complete cds. |