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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.3G281000.3.p |
Common Name | LOC101773766, SETIT_022619mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 263aa MW: 28478.2 Da PI: 4.2531 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.3G281000.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 12 | 63 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+gy+GVr++ +g+WvAeIr+p + r r +lg+f tae+Aa+a+++a+++++ge
Seita.3G281000.3.p 12 CGYRGVRQRT-WGKWVAEIREP---N-RaNRLWLGTFPTAEDAARAYDQAARAMYGE 63
79*****999.**********8...3.469************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MKGKGGPENT HCGYRGVRQR TWGKWVAEIR EPNRANRLWL GTFPTAEDAA RAYDQAARAM 60 YGEVARTNFP RQNAVASSQV AWAATPAQVA PSVVEGVVHS TSCESTTTSN HSDIASTLHK 120 PEVSDLSSSV KVECPEVVEA GSRRSEMVSG TSHQHEDSHP STQASTPNVG DKEVFEPLEP 180 IANLPEGDFD GFDIDEMLRM MEADPQNEGG AGAGMEQPFY FDGLDSSLLE SMLQSEPEPY 240 SLSEEQDMFL AGFESPGFFE GL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AY829439 | 0.0 | AY829439.1 Pennisetum glaucum DREB 2A mRNA, complete cds. |
GenBank | DQ227697 | 0.0 | DQ227697.1 Pennisetum glaucum transcription factor DREB2A gene, complete cds. |
GenBank | KC688699 | 0.0 | KC688699.1 Cenchrus americanus dehydration responsive element binding protein 2A (DREB2A) mRNA, complete cds. |