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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.3G145700.1.p |
Common Name | SETIT_024258mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 277aa MW: 29564.9 Da PI: 6.1545 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.3G145700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.2 | 2.4e-19 | 120 | 171 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+++AeIrd + k +r++lg+f taeeAa a+++a+++++g+
Seita.3G145700.1.p 120 SYRGVRRRP-WGKFAAEIRDtRR---KGARVWLGTFTTAEEAALAYDKAALRMRGP 171
69*******.**********332...34**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MTIGAPGSHH QPGNEAANIL ENVWATIMTE STTTPASSTA ASSEVGEEKP EAILQRLPSL 60 GRWISMGAEE WDELLLSGAA LTSDASGELL LAASPAASQD QDRRDDRRAS SNKAAVACKS 120 YRGVRRRPWG KFAAEIRDTR RKGARVWLGT FTTAEEAALA YDKAALRMRG PRAHLNFPLD 180 VVQRELAGNG GCGEASRVLR RRRRGSNAAA DTRSHGSVSA TDGGCDQTMV SFACGRKDQG 240 ASSPMVQEPS ISDPGAVIEF EDIGGEYWDY LFAPLV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU685412 | 1e-119 | KU685412.1 Saccharum spontaneum clone SES23E05, complete sequence. |