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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.2G390000.1.p |
Common Name | LOC101766995, SETIT_030514mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 327aa MW: 36480.3 Da PI: 4.5401 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.2G390000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 100 | 150 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+G+r+++ +g+W+AeIrdp++ r++lg++ taeeAa+a++ a+++++g
Seita.2G390000.1.p 100 TQYRGIRRRP-WGKWAAEIRDPCK---GVRVWLGTYNTAEEAARAYDVAARRIRG 150
58********.**********854...3*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009873 | Biological Process | ethylene-activated signaling pathway |
GO:0034059 | Biological Process | response to anoxia |
GO:0071456 | Biological Process | cellular response to hypoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MCGGAILSDL YSPVRRTVTA GDLWAESGSR RSGKNQKRSS WEFDEADDDD FEADFEDFED 60 CSSVEEVDFG HEEKDFQINS SIFMKFNDHT AKVARRKRKT QYRGIRRRPW GKWAAEIRDP 120 CKGVRVWLGT YNTAEEAARA YDVAARRIRG KKAKVNFPDT ITASAKRLPG RVPRPAKKVM 180 SQESLKFSSA SEHAISAGSS TDATVVKIEL SESDSPLPMS SAWLDAFELN QLDGSKYLEA 240 GGKETTEETD HENGVTADMV FGNGEVWLAD EFAYYEPYPN FMQLPYLEGN SYENIDALFN 300 GEVAQDGVNI GGLWSFDDVP MDSGVY*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 94 | 108 | RRKRKTQYRGIRRRP |