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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.2G361300.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
YABBY |
| Protein Properties |
Length: 164aa MW: 17576 Da PI: 6.6528 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.2G361300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 132.3 | 6.3e-41 | 15 | 160 | 7 | 168 |
YABBY 7 seqvCyvqCnfCntilavsvPsts..lfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95
+e++ yvqC+fC til+vsvP +++v+v+CG C+ +lsv++ + a+ + ll+e + ++++s++
Seita.2G361300.1.p 15 PERLGYVQCSFCATILLVSVPCGGglQLETVAVQCGNCAGILSVTVPPSPP---ASIE-------LLLQEPALDPP-----PRDSDESSAE 90
899******************98622567999***********99876532...2222.......23333333322.....2223333333 PP
YABBY 96 vsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168
+ + e++ p v++PP ++qr Psayn+fikeei+rika +P+i+h+eafsaa+knWah+P+i
Seita.2G361300.1.p 91 DREAEAAVAENHAF---PAVNKPPVRKQRTPSAYNCFIKEEIRRIKARDPNITHKEAFSAASKNWAHLPRIQQ 160
33322233344444...479**************************************************975 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 164 aa
Download sequence Send
to blast |
MASAAHHPCF GGLLPERLGY VQCSFCATIL LVSVPCGGGL QLETVAVQCG NCAGILSVTV 60
PPSPPASIEL LLQEPALDPP PRDSDESSAE DREAEAAVAE NHAFPAVNKP PVRKQRTPSA 120
YNCFIKEEIR RIKARDPNIT HKEAFSAASK NWAHLPRIQQ KEN*
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