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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.2G269600.1.p |
Common Name | LOC101781817, SETIT_030810mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 269aa MW: 27880.2 Da PI: 9.8628 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.2G269600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.3 | 5e-20 | 122 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg++ t+eeAa+a++aa+++++g
Seita.2G269600.1.p 122 HYRGVRRRP-WGKWAAEIRDPA----KaARVWLGTYATPEEAARAYDAAARRFKG 171
69*******.**********83....36************************988 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MGVGVVVTGE EVDERRAWFI QVQAGAARPG GMHGDRGLVA PWWGEEEQEE RVAAVGGGFV 60 GHCYSAARAE YDAAAVAAAL TYVVCATEPP PPTTRGGGVA ASALPPAPWQ GRRHGGGGAQ 120 QHYRGVRRRP WGKWAAEIRD PAKAARVWLG TYATPEEAAR AYDAAARRFK GAKAKLNFPA 180 TAAPSQRPQQ QATAAHLPII SPSPPSSPTF AAAATVVEFP GLWQYAHILQ SSDAGHVRAV 240 ASGLPPPPPV GSGHGRDGIG GGSVGDRR*
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