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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.2G225800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
GeBP |
Protein Properties |
Length: 444aa MW: 47349.6 Da PI: 8.4439 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.2G225800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 92.9 | 3.6e-29 | 192 | 290 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkife 90
+++rlws De+v+L+Gl ++ak+g+ +++di +f+ +++++s++v+ +q+++K+rrLK+K++ ++ak+g++p++ ++hdq+++e
Seita.2G225800.1.p 192 RPSRLWSPADELVILRGLAACRAKRGVlpGSMHDIAKFHGHIESELSVQVTVTQVSDKVRRLKQKYNLFASRAKNGRDPDLPTPHDQSVYE 282
679************************877888********************************************************** PP
DUF573 91 lskkiWgs 98
l k++Wg+
Seita.2G225800.1.p 283 LGKRVWGT 290
******95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MAPKRPAAAP SGSASEASDA EADAPLHHPS SPSPSKTPPP PNPNPKSSAA AAAAMAAEDS 60 AAAGSDSGAA YDSDADHRPA LRKEGAAASP SRRPRSPRPP SRSRSPDAAS ESDGAASDAD 120 PAAGDGADSA DDGNASPLPA PRPPRGEAAA IKPLSSRPMD PPRHSMVPSF TEPRRKRPRS 180 VAVPSSVEQL KRPSRLWSPA DELVILRGLA ACRAKRGVLP GSMHDIAKFH GHIESELSVQ 240 VTVTQVSDKV RRLKQKYNLF ASRAKNGRDP DLPTPHDQSV YELGKRVWGT TDIAGGGSTA 300 GDGYEISGGG GESEEEREIG ESDEDEDSGR DDRARKNRRL RPITMANGNV AGFGAVNVNS 360 RGKFDFEKGK DAYPYLWETV EDLSKEHPHG VAFKKAFELI EGPKARGMEE KLRKFRLTEI 420 RHQLRRMELM KETVKMVLDA LEG*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G00390.1 | 2e-14 | DNA-binding storekeeper protein-related transcriptional regulator |