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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Seita.1G333400.1.p |
| Common Name | LOC101785158, SETIT_017925mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
GeBP |
| Protein Properties |
Length: 300aa MW: 32652.9 Da PI: 10.5207 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.1G333400.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 35.7 | 2.4e-11 | 117 | 181 | 6 | 69 |
DUF573 6 lwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkv 69
ws+ De +lL + + f++++g p d+ ++++ + +sis ++ + + K++rLK Kf++
Seita.1G333400.1.p 117 KWSDADEFTLLAAAVAFRERNGHAPRLpDMAELFDSICDSISPHIDQFMVYYKMKRLKSKFQHSD 181
5**********************98877*********************************9865 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MSSRRPSASA MDADAPPSPP RSKKRPSRRS DSDWSPNPSP RGSPTEHKRR RRTSAESAAL 60
ALTAVAARAS AAGSDAGRGG ARRSQRPRRR TARADGGDGA IQMLGAAAAR VGVQKHKWSD 120
ADEFTLLAAA VAFRERNGHA PRLPDMAELF DSICDSISPH IDQFMVYYKM KRLKSKFQHS 180
DGPRDRRLRN MCSVLWGVGV VPSSEDDSDA GERSGVPDAA AMMPVVAEVL GEYWKTNERV 240
MAGVPLEKGL SLLGKKEGRL LETKWRQQLD EEMQSQMRQH DLAKEVCGLL TDAIKGLGP*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC216353 | 0.0 | AC216353.5 Zea mays BAC clone CH201-194K18 from chromosome 5, complete sequence. |
