 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Seita.1G333300.1.p |
| Common Name | SETIT_017003mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
GeBP |
| Protein Properties |
Length: 285aa MW: 30488.1 Da PI: 6.1763 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.1G333300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 40.1 | 1e-12 | 93 | 181 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92
+q+lws+ De++lL + f+++tg p d a++ + +sis ++ + +K+ rL Kf + + s + +hd+ + +ls
Seita.1G333300.1.p 93 VQSLWSDADEVTLLAAAAAFRERTGRVPRLpDAAALFGSIGDSISPHIDEAKAYDKLSRLESKFLHGASG-------SPAGTHDRRVHDLS 176
799***********************77766*********************************998888.......78899********* PP
DUF573 93 kkiWg 97
k+Wg
Seita.1G333300.1.p 177 TKVWG 181
****8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MPSDQLSAST VDADAAPASL SSPRWKKPSS GPHPRTGDCD RGPNPSPLGA PSCRSELKRR 60
LRESAEAARG SGDGGRQRLG LAGVTVGVGH GAVQSLWSDA DEVTLLAAAA AFRERTGRVP 120
RLPDAAALFG SIGDSISPHI DEAKAYDKLS RLESKFLHGA SGSPAGTHDR RVHDLSTKVW 180
GLANVVSPPE DDSDGQDAEE SCNASTVMPV VTEVLAEYWK MNERALAGFP LEKGLSLLSK 240
KEGRLMETRW RKQLDEEMQT QMQRHDLAKE ICVLLNDTVK DLSS*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G00250.1 | 1e-07 | DNA-binding storekeeper protein-related transcriptional regulator |
