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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.1G332600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 239aa MW: 24648.4 Da PI: 4.3926 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G332600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.6 | 6.3e-18 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g
Seita.1G332600.1.p 34 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 83
69****998.**********9...336************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0034605 | Biological Process | cellular response to heat |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0071497 | Biological Process | cellular response to freezing |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MVKGGAQLQD AAVDGAAGNA AAAAARQQGA GKRQYKGVRM RSWGSWVSEI RAPNQKTRIW 60 LGSYSTAEAA ARAYDAALLC LKGSAADLNF PVPLPFHIPA AAMSPKSIQR VAAAAAANAG 120 CSPLQPGAGG PYYSGAAAIN ATTPPCSYGD ASSGASSPET GNTGQYYEMA HDDIDMTGDA 180 DLAALADIEA FFQSPKCMEY AMMDPCSSFF APAPMATDAA NEWEEEGEIN LWSFSSVN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK377012 | 1e-117 | AK377012.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3145K04. |