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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.1G269700.1.p |
Common Name | SETIT_017619mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Dof |
Protein Properties |
Length: 373aa MW: 37611.7 Da PI: 8.6625 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G269700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 125 | 2.3e-39 | 75 | 136 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
Seita.1G269700.1.p 75 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 136
7899******************************************************9875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009639 | Biological Process | response to red or far red light |
GO:0009845 | Biological Process | seed germination |
GO:0005634 | Cellular Component | nucleus |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MDAAQWHQGL GLGKPMEEML MAGNTNPNQN PNPPPAAPSA APAAQRAPGA PAAAAPAPAA 60 AGAGAGTERR ARPQKEKALN CPRCNSTNTK FCYYNNYSLQ QPRYFCKTCR RYWTEGGSLR 120 NVPVGGGSRK NKRSSSAVSS AATAAASTSA AVSGTIPVGL AAKHPKLMHE GAHDLNLAFP 180 HHNGRGLHPP EFSAFPSLES SSVCNPGATM AGNGAAGRGV GALSAMELLR STGCYVPLQH 240 VQLGMPAEYA AAGFALGDFR MPPPPHSQSV LGFSLDTHGT GGVGGAGGYS AGLGVQESAA 300 GRLLFPFEDL KPAVSAAGGA NNNGADQYEH SKDQAGDGSG ASGVTTGGHE TPGFWSNSII 360 GNGSSNGGGG PW*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250|UniProtKB:Q6K537}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC582410 | 0.0 | KC582410.1 Sorghum bicolor dof16 protein (dof16) gene, partial cds. |