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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.1G257600.1.p |
Common Name | LOC101778978, SETIT_017790mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 325aa MW: 34191.2 Da PI: 6.5171 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G257600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 145 | 196 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+++g r++lg+++ta eAa+a+++a+ +++g+
Seita.1G257600.1.p 145 KYRGVRQRP-WGKFAAEIRDPKKRG--SRVWLGTYDTAIEAARAYDRAAFRMRGA 196
8********.***********8876..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MDYSGELDDF SLQLIREQLL GGEALACLPV GPDAAAAYSA SSVHPAAQAA FHHQPAAFVP 60 HQHQQQAAYV DLTNEYADAA AAAAVVEAAA FRAEPVMIRF GGEPSPVSDP SRRPLLTISL 120 PPTSHAWGGP AAAPAQALDA NDFRKYRGVR QRPWGKFAAE IRDPKKRGSR VWLGTYDTAI 180 EAARAYDRAA FRMRGAKAIL NFPNEVGSRG ADFLAPPPPQ ASQNKRKLQH DAAGAEPAAK 240 SVKAEAFGSP ASSSLTSSLS PATTTASTVT ATSSSPSSEA GATEMFPFPM TPSSWTWEQL 300 EGVFGSLSPL SPHPQLGFPE VTVN*
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