 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Seita.1G251700.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
YABBY |
| Protein Properties |
Length: 137aa MW: 14370 Da PI: 10.0046 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.1G251700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 68.4 | 2.7e-21 | 45 | 90 | 11 | 56 |
YABBY 11 CyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql 56
Cyv+Cn C+tilav vP +slfk+vtvrCGhC+s+lsvnl+
Seita.1G251700.1.p 45 CYVHCNCCETILAVGVPCSSLFKTVTVRCGHCASMLSVNLHGLLLP 90
***************************************9987633 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 137 aa
Download sequence Send
to blast |
MSSKSIGLHS IVEIYRDVVL VLLVVGRHPA GPPRAVPHRA ALLPCYVHCN CCETILAVGV 60
PCSSLFKTVT VRCGHCASML SVNLHGLLLP PAAQVPSFLM NQASANVSAA ATAAAAATCR 120
PRRCRKRSRL CSRSPS*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU960773 | 2e-73 | EU960773.1 Zea mays clone 228481 yabby15 protein mRNA, complete cds. |
