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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.1G205600.1.p |
Common Name | SETIT_017107mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
EIL |
Protein Properties |
Length: 471aa MW: 51087.7 Da PI: 5.0092 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G205600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 352.2 | 1e-107 | 62 | 358 | 2 | 290 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX...............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn...............ksneqarrkkmsraQDgiLkYMlkemevcnaqGfv 73
+lk+rmwkdqmll++l++r + +a ++ + +rk+m raQDg+L++Mlk+me+cna+Gfv
Seita.1G205600.1.p 62 DLKRRMWKDQMLLNKLEGRAGAFRAVGAEAglssR-----PlvlpgagaeglaeeeTPDVRCQRKAMLRAQDGVLRHMLKMMEACNARGFV 147
9******************9986544443334440.....2556666666666666999******************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--T CS
EIN3 74 YgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfpl 164
Yg i+e g+p++g+sdsLr+WWk++v+fdr+gp+a++ +++ges l s h+l+++qD+tlgS+Lsal+qhc+ppqr+fpl
Seita.1G205600.1.p 148 YGVIDEAGEPMSGSSDSLRGWWKDNVSFDRAGPMALT-------VPAGESPLG--IASCLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPL 229
***********************************98.......778999994..58999******************************* PP
TT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTT CS
EIN3 165 ekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqee 254
e+g++pPWWPtG+e wwg++g ++++qg ppy+kphdlkkawk+s+L+avikhm+p+++++r+l++qsk+lq+kmsake+ +++++l+qee
Seita.1G205600.1.p 230 ERGLAPPWWPTGQEVWWGAQGeVQAHQGVPPYRKPHDLKKAWKISLLSAVIKHMNPRFDQMRKLVWQSKRLQQKMSAKETEVWSKILRQEE 320
******************************************************************************************* PP
T-S--XXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 255 kecatvsahss..slrkqspkvtlsceqkedvegkkes 290
+ ++++++ + l +++ + l++ + +++k++
Seita.1G205600.1.p 321 VLSRRLKTSLQitPLDNDDDDDGLEDVVGRAHDKRKRE 358
*****999955445555555555555555555555554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MNHGIHGRRH PFSEAAMEHD VAHGGGAGGV PAGEAFEAVL DQLEQEELSD SESGSESIEI 60 SDLKRRMWKD QMLLNKLEGR AGAFRAVGAE AGLSSRPLVL PGAGAEGLAE EETPDVRCQR 120 KAMLRAQDGV LRHMLKMMEA CNARGFVYGV IDEAGEPMSG SSDSLRGWWK DNVSFDRAGP 180 MALTVPAGES PLGIASCLHR LQDIQDSTLG SVLSALIQHC EPPQRSFPLE RGLAPPWWPT 240 GQEVWWGAQG EVQAHQGVPP YRKPHDLKKA WKISLLSAVI KHMNPRFDQM RKLVWQSKRL 300 QQKMSAKETE VWSKILRQEE VLSRRLKTSL QITPLDNDDD DDGLEDVVGR AHDKRKRELI 360 STSRDNSWSS GSGGSRGGSG ELAVMLPELA ALVAADDESR LSPIDELVKL YCSHAPADQG 420 GGGHPESGAV AVVPPVELDM FSAGVVPPDV PFDLIGSCSG LDDVFLLMLD *
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726967 | 0.0 | KJ726967.1 Zea mays clone pUT3668 EIL transcription factor (EIL5) gene, partial cds. |