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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Seita.1G050400.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 467aa MW: 49606.8 Da PI: 8.9048 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G050400.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.6 | 4.1e-11 | 140 | 180 | 3 | 43 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
+ k rr+++NReAAr+sR+RKka+i++Le+ L++ +
Seita.1G050400.2.p 140 DAKTLRRLAQNREAARKSRLRKKAYIQNLETSRIRLSQLEQ 180
67999*************************86555555444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MIQAASSSAH GGIIKEPGGG YDMAEFDQAL FLYLNSQDQT SAAHHQDQPQ TLNIFPSQPM 60 HIAEPAPKQG SMGTSNTAPI AGAGPSKQPP PPSNHPSRPT PAALKDGKPA GVKREGSSGA 120 ATGSGTPSTS NQQEGPRTPD AKTLRRLAQN REAARKSRLR KKAYIQNLET SRIRLSQLEQ 180 ELHRSRNQGA VFGGGALSGS NGGLSPEAAW FDMEHARWQE EHGKMMRHLR AALEAADQQH 240 PAAPAPAPAA DAQLRQLVDA AAAHHGVLAD LKAAVASADA FHLVSGAWAS AAERCFLWIG 300 GFRPSELIKV AARHAEPLTE PQAMGVCGVQ QWAREAEAAL DHELQAMHRS VSEAVSSDAA 360 ALLCPYSDVP GYMATMSLAI AKLASLEAFV RQADALRLQA LHRLPQILTA RQAARCFLAI 420 ADYSHRLRAL SELWHTRPRH EPVATIPAAG PSHGQPFQSS RAGGLL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |