 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.1G024500.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
BES1 |
Protein Properties |
Length: 419aa MW: 41960 Da PI: 10.3563 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G024500.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 138 | 9.3e-43 | 54 | 165 | 4 | 119 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspess 93
r+p++ ErEnn+rRERrRR ++++iy+ LRa+Gny lp +DnneVlkA creAGwvve+DGttyr+gs+p+ g+ a +sp ss
Seita.1G024500.1.p 54 ARTPSQVERENNRRRERRRRLVSSRIYTALRAEGNYTLPRNCDNNEVLKAVCREAGWVVEPDGTTYRRGSRPPrGVLGGFGATAPVSPASS 144
799**********************************************************************333344444444566666 PP
DUF822 94 lqsslkssalaspvesysaspksssf 119
+ + + p++sy ++ sss+
Seita.1G024500.1.p 145 TPP-----TPTPPTASYGLTLGSSSS 165
552.....233445555555555544 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 419 aa
Download sequence Send
to blast |
MNGGGGMVAA GAGGAGGSGG GGGGDRDRGK GIVFGNGYGS ARGRAKGRAR NAPARTPSQV 60 ERENNRRRER RRRLVSSRIY TALRAEGNYT LPRNCDNNEV LKAVCREAGW VVEPDGTTYR 120 RGSRPPRGVL GGFGATAPVS PASSTPPTPT PPTASYGLTL GSSSSSSSYL TLGGGSGGIF 180 YGAAGGGGSS SGLPAWFQRL SQAGGQASSS TTASAPVTPQ NASPPQLTLA RWAAEDNAAA 240 AAAAAAAANL QPRWAAGAGP SRYAPQAQQQ PLTMPPSPVG GGSGAVDPVL LLAGIQISAA 300 ANNNNNYRRP PRPYTYSPLG TPGASSFAAG ASSSRMGTPG PVQSSGGPWA PAPAPAPAPA 360 PAPAPASRGG GDGDGDVEME PREFSFAWDG EVSREDYTDE DGLELTLGNS KTRADRRG*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5zd4_A | 2e-19 | 75 | 132 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-19 | 75 | 132 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-19 | 75 | 132 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-19 | 75 | 132 | 392 | 449 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK101229 | 8e-32 | AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence. |