PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.2325s0030.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 278aa MW: 31309.5 Da PI: 4.0696 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.7 | 2e-18 | 17 | 73 | 2 | 58 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekew 58 ppGfrFhPtdeelv +yLkkk+ +k++el ++i+e+d+yk++P++Lp +++++ +++ SapurV1A.2325s0030.2.p 17 PPGFRFHPTDEELVLYYLKKKICKKRIEL-NIIRELDVYKWDPEELPaGELTTSGQHY 73 9****************************.99***************53433322221 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-17 | 12 | 73 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 12.989 | 16 | 176 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-8 | 17 | 58 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
MTVTADSCLG ADDKAWPPGF RFHPTDEELV LYYLKKKICK KRIELNIIRE LDVYKWDPEE 60 LPAGELTTSG QHYNKYTSFN FNQSATSTLQ LHEAPEVTSS PNCEEAPQLN EEDFLEIDDL 120 IGPEPSFFST EQPAENLKFD DFDGLSELDV YDDAAMFFHG MGPVDQEAVS CSYVNSYACD 180 VINQASYQLQ PNTITNLVDY HLQPNLVANQ VDYELQPQFF DSEQMNSQLW VHDHQNNALA 240 TSESHHGILF QSTANQCRAL DEMGGLSGRK AYVNLGL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.2325s0030.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011044815.1 | 1e-114 | PREDICTED: NAC domain-containing protein 69 isoform X2 | ||||
TrEMBL | A0A2K2AJE6 | 1e-106 | A0A2K2AJE6_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s22180.1 | 1e-107 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34190.1 | 4e-21 | NAC domain containing protein 17 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.2325s0030.2.p |