 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SapurV1A.2210s0020.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
| Family |
C2H2 |
| Protein Properties |
Length: 326aa MW: 36510 Da PI: 7.8145 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.2210s0020.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 19.9 | 1.9e-06 | 166 | 185 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C+k+F+r nL+ H+
SapurV1A.2210s0020.1.p 166 FSCPLCSKTFNRYNNLQMHM 185
89*****************9 PP
|
| 2 | zf-C2H2 | 16.8 | 1.9e-05 | 252 | 274 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C +Cgk+F k + ++H +++
SapurV1A.2210s0020.1.p 252 FTCRKCGKPFAVKGDWRTHEKNC 274
89*****************9987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MADPCSGSFN FMLLHPHYTA STPNYSNPSS LHAFSGNYSI NNKSSFPPSP PPKKALPLID 60
YFSPTRQQEE HRESSCSSME EDKSIQKDDD NLLFSTANGD FEPVAVALHI GLPSPTSDLQ 120
IRVFPSPNAA DKEEMSAVSG YPLETVNKGQ YWIPTPSQIL NGPSQFSCPL CSKTFNRYNN 180
LQMHMWGHGS QYRKGPDSLR GTQPTAMLKL PCYCCEPGCN HNIDHPRARP LKDFRTLQTH 240
YKRKHAHGVK PFTCRKCGKP FAVKGDWRTH EKNCGKIWYC ICGSDFKHKR SLRDHTKVFG 300
HAGYGCSEEM DEPASETEHD GESCM*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
