PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0958s0170.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29879 Da PI: 6.0644 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 134.6 | 6.8e-42 | 7 | 129 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 pGfrFhPt++el+++yL+k v+g+++ ++i ++iy++ePwdLp +k +e+ewyf ++r+ r++r+t++gyWkatg+d SapurV1A.0958s0170.1.p 7 PGFRFHPTEQELLDFYLTKAVSGQDMV--DIIGFLNIYNHEPWDLPGLAKIGEREWYFLVHREAIF---GRPRRTTEKGYWKATGSD 88 9***********************954..589**************8888899********98876...59**************** PP NAM 90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ ++ ++l g kktLvfy+grap+g+ktdWvm+eyrl SapurV1A.0958s0170.1.p 89 RPIRCSmdLKRLLGHKKTLVFYRGRAPRGSKTDWVMNEYRL 129 ****98766778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-47 | 5 | 147 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 49.034 | 5 | 147 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-23 | 7 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MEFDELPGFR FHPTEQELLD FYLTKAVSGQ DMVDIIGFLN IYNHEPWDLP GLAKIGEREW 60 YFLVHREAIF GRPRRTTEKG YWKATGSDRP IRCSMDLKRL LGHKKTLVFY RGRAPRGSKT 120 DWVMNEYRLP GNFFLSKEMV LCKVYRKATP LKVLEQRAAM EETARAPPPN VTSSSPPITQ 180 ENFSSYEQPQ SFNKLLLEQN NVVHRVEGVA AIEEEEEDDR TGYPSQIVGA VPIRELYYEL 240 QSPKPVLDWS LDSFWLN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-37 | 2 | 147 | 12 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0958s0170.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002307224.3 | 1e-148 | NAC domain-containing protein 22 | ||||
Refseq | XP_011022209.1 | 1e-148 | PREDICTED: NAC domain-containing protein 100-like | ||||
Swissprot | Q10S65 | 2e-73 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2K2AER3 | 1e-146 | A0A2K2AER3_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s10610.1 | 1e-147 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6214 | 32 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 3e-83 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0958s0170.1.p |
Publications ? help Back to Top | |||
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