PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0876s0040.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family MYB_related
Protein Properties Length: 267aa    MW: 30053.2 Da    PI: 4.5091
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0876s0040.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-0823472348
                            -HHHHHHHHTTTS-HHHHHHHHHHHT CS
         Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                            +W++Ia++++  Rt++++k++w+++l
  SapurV1A.0876s0040.2.p 23 RWAAIASYLP-QRTDNDIKNYWNTHL 47
                            5*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.79E-91653IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.4E-132255IPR009057Homeodomain-like
CDDcd001679.76E-62247No hitNo description
PROSITE profilePS500906.4352347IPR017877Myb-like domain
PfamPF002494.3E-72347IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009416Biological Processresponse to light stimulus
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010118Biological Processstomatal movement
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MTELHVMDQF ESFLLFLICL DDRWAAIASY LPQRTDNDIK NYWNTHLKKK LKKFQSTLDP  60
TAQGSASSQF MSKSFNERNS LDDVITTNSS VLNRPNQVST YASSTENISR LLEGWMRSSP  120
KQNGTDLLKE SWEKNNSSMK KNDDSLGNSV ATDSLQSYRP RPEEESGDLI SHEEFESILS  180
LENLNNVAWD KSSCDSATVT TPTATATTTK GFKNTTGDEK DNITTTERKQ KSDESSTPPL  240
SFLEKWLMDE NGTVQVEEIM ELSPIF*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light). {ECO:0000269|PubMed:22018045}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00132DAPTransfer from AT1G08810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0876s0040.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by abscisic acid (ABA) and osmotic stress (salt stress). {ECO:0000269|PubMed:22018045}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002319734.11e-143myb-related protein 306
SwissprotB3VTV73e-59MYB60_VITVI; Transcription factor MYB60
TrEMBLA0A1L6K5531e-142A0A1L6K553_POPTO; Uncharacterized protein
STRINGPOPTR_0013s06390.11e-143(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.19e-32myb domain protein 60
Publications ? help Back to Top
  1. Jaillon O, et al.
    The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
    Nature, 2007. 449(7161): p. 463-7
    [PMID:17721507]