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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0802s0090.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
GATA |
Protein Properties |
Length: 259aa MW: 29179 Da PI: 9.3062 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0802s0090.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 63.9 | 1.8e-20 | 179 | 213 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+ kTp+WR gpdg+ktLCnaCG++y++ +l
SapurV1A.0802s0090.1.p 179 CQHCGVEKTPQWRAGPDGPKTLCNACGVRYKSGRL 213
*******************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MESLDTAAGF MVDDLLDFGS DIGEEEDGEE HRKNNIISRK ALPSFNPNAL PLASFNVLEH 60 SFLPEFAEEE LEWLSNKDAF PTVETFFGSL SGEPGSIPKH HSPVSVLENS TTSSTSNSVN 120 SSNGNIIMSY CRLRVPVKTR SKRRHRRPRE IQEQECWWSQ ENFTRRKPAV SVPKMGRKCQ 180 HCGVEKTPQW RAGPDGPKTL CNACGVRYKS GRLVPEYRPA NSPTFSSKLH SNSHRKVVEM 240 RRQKQMMGFL VKKPMDKG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC149482 | 0.0 | AC149482.1 Populus trichocarpa clone Pop1-69G3, complete sequence. |