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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
SapurV1A.0680s0040.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
GATA |
Protein Properties |
Length: 289aa MW: 31716.7 Da PI: 8.6432 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0680s0040.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 54.1 | 2.1e-17 | 220 | 254 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++C + Tp+WR gp g+ktLCnaCG++y++ +l
SapurV1A.0680s0040.1.p 220 CAHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 254
*******************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 289 aa
Download sequence Send
to blast |
MDICRNVTLS AEYHQQEKVL ASPPPCPKLA AAASTAATLP LDDLFSAQNT EVDFSLEWLS 60 VFVEDCLSST GNCLPAPTVE AQKPNTEDTP PKTWKQKPQD QEDPSPLKKP VIPGKSRSKR 120 RRLSGDKTRN PLTSWCSTSQ ALNNFSSSDP PLLQQTYWLA DSELIMPRKE DSSSTGMDSE 180 VREESRSDQG KAGAAAGSGG GRDRLKVVES SNGQQQPRRC AHCLAQRTPQ WRAGPLGPKT 240 LCNACGVRYK SGRLLPEYRP AKSPTFVSFL HSNSHKKVME MRMASDQW*
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