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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0625s0080.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
Trihelix |
Protein Properties |
Length: 595aa MW: 66478.2 Da PI: 6.4139 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0625s0080.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 89.4 | 3.9e-28 | 64 | 147 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++qe+laL++ r+ m+ +r+++lk+plWe+vs+k++e g++rs+k+Ckek+enl k++k+ikeg+ ++++++ t+++f +le
SapurV1A.0625s0080.1.p 64 RWPRQETLALLKTRSAMDAVFRDSSLKGPLWEDVSRKLAELGYHRSAKKCKEKFENLYKYHKRIKEGRTDKSEGK--TYKFFYELE 147
8*********************************************************************75555..69***9998 PP
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2 | trihelix | 101.5 | 6.5e-32 | 409 | 494 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r +++ ++r++ +k+plWe++s+ m++ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyfdql+a
SapurV1A.0625s0080.1.p 409 RWPKAEVQALINLRVNLHIKYRENGAKGPLWEDISAGMQKLGYNRSSKRCKEKWENINKYFKKVKESNRKR-PEDSKTCPYFDQLDA 494
8*********************************************************************8.99***********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 595 aa
Download sequence Send
to blast |
MLGDSSLVAT SSDVETTATS VVPEEGGQVC EVGGAGGFGS NSTEEDKNTG VDHKADQMNY 60 GANRWPRQET LALLKTRSAM DAVFRDSSLK GPLWEDVSRK LAELGYHRSA KKCKEKFENL 120 YKYHKRIKEG RTDKSEGKTY KFFYELEAFQ NHHSHSAQSP TKLPPPLPPP KAQTPTATTA 180 TLAWTTTGPA IVSHVTVPST TSPIDIMSQG IGTPATIHTI NAMPLSSNYL NPSQNTSPSS 240 LQNLVTHLFS SSTSSSTASD EKMEGGRKRK RKRNWKDFFL RLTRDVIKKQ EDLQKRFLET 300 VDKCEHERMS SEEAWRMKEI ARMNREHEAL IQERSMAASK DAAFLAFLQK ITGQQNSTET 360 QAIPQPKLTP PPPQPPQPRP RPSSLATATN LEVSKWDNGE NVTTPSSSRW PKAEVQALIN 420 LRVNLHIKYR ENGAKGPLWE DISAGMQKLG YNRSSKRCKE KWENINKYFK KVKESNRKRP 480 EDSKTCPYFD QLDALYKEKN IMESVVSTGY DVKPISTMEP LMVLPEQQLP FEHANLPETI 540 IEDNERDINF DPNIEEDDEI YDDGGGGGDT EQEEDEGGDF EVAAHKPASL GNGE*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 266 | 271 | RKRKRK |
2 | 266 | 272 | RKRKRKR |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |