PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0586s0190.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 419aa    MW: 46955.1 Da    PI: 4.7498
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0586s0190.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM774.2e-24121302128
                     NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                               Gf+F+P+de   ++yL +k++g+ ++    i++v+++++eP++Lp + +++ ++ yfF++rd +   gk ++r+tk+g Wk+t  
  SapurV1A.0586s0190.1.p  12 EYGFKFQPSDELCFSKYLVPKTRGDIMKG-FPIEDVNLCEHEPRNLP-CNNNTITSKYFFCPRDLR---GKIHRRKTKAGQWKQTCD 93 
                             57************************999.56***************.444556789******985...7789999*********** PP

                     NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                              k+++++ +++++g+ +tL fy+     +++t W++ e+ l
  SapurV1A.0586s0190.1.p  94 PKSIMAEgTENEIGVMRTLRFYE----GAVRTGWMIYEFDL 130
                             ******966778**********5....456899*****986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-238147IPR003441NAC domain
PROSITE profilePS5100528.11311150IPR003441NAC domain
PfamPF023651.1E-1413130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MANPTALLQL MEYGFKFQPS DELCFSKYLV PKTRGDIMKG FPIEDVNLCE HEPRNLPCNN  60
NTITSKYFFC PRDLRGKIHR RKTKAGQWKQ TCDPKSIMAE GTENEIGVMR TLRFYEGAVR  120
TGWMIYEFDL ISEPSLFQKG QYVLCKLESD SEGVKSKKRK RSHRIAPVSR SEVEPSQSMD  180
SDSQNINPSE MAVNSPCDES GLSHHVGLQF GNQNSGELID SSARQFSEFS HHRTSEFRNQ  240
ISDNLMSDLV HDGSGSSHST VFNRENQYWN QPTVDSAYNG SESPCESGNS MVMPCSFINQ  300
STYDKSEPSS LIPFDFDYQN LSKAIDISAF AEGVWSNITA TPPDSVNQNP CKKPDMSAAP  360
EEVNSSYSEP FFSDSYLPEV SPGQAEMEGC FEQENIPNPA HFQLPACMEE NHSFMGGL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156161KKRKRS
2157162KRKRSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0586s0190.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011042555.11e-136PREDICTED: protein ATAF2-like
TrEMBLA0A3N7GVF61e-128A0A3N7GVF6_POPTR; Uncharacterized protein
STRINGPOPTR_0014s07220.11e-127(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1900836
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-18NAC transcription factor-like 9