PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0550s0150.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 349aa MW: 38312.4 Da PI: 5.2474 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 155.4 | 2.5e-48 | 7 | 135 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 l+pGfrFhPtd elv++yLk+kv gkkl++ ++i+e++i+k+ PwdLp k ++++++ +wyfF++++kkya+g r +rat+ g+Wk+ SapurV1A.0550s0150.4.p 7 LTPGFRFHPTDVELVKYYLKRKVLGKKLHF-QAIAEIEINKYAPWDLPdKsCLRTGDLKWYFFCPTEKKYASGVRMKRATDIGFWKT 92 579*************************99.89**************96347788999***************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tgkd++v k+e+vg+ ktLvf++g+ pkg++tdWvmheyrle SapurV1A.0550s0150.4.p 93 TGKDRHVQY-KNEDVGMIKTLVFHTGKPPKGSRTDWVMHEYRLE 135 ********9.8999****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.76E-55 | 5 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.321 | 7 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.4E-26 | 9 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MGRNSSLTPG FRFHPTDVEL VKYYLKRKVL GKKLHFQAIA EIEINKYAPW DLPDKSCLRT 60 GDLKWYFFCP TEKKYASGVR MKRATDIGFW KTTGKDRHVQ YKNEDVGMIK TLVFHTGKPP 120 KGSRTDWVMH EYRLEEKELA EKGIAQDGYV LCVLFKKDGP GPKNGAQYGA PFNEDEWDDD 180 EVEEEVNVQL AILPAVMHAH AIMLPTNPNM SIATSSRVSE CTCAGPLISC PSQTPSSACT 240 TLPRVSNDVV ASTESLQVVH GGVNGGEADS SAGMSAPALQ QTCKPNSPIL ASSSSYVPEN 300 TCSAYIPSVS QGEAPQIVDD YDDIFSSLDL LDNVYTEVCL SVLLNQCI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-43 | 6 | 163 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-43 | 6 | 163 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-43 | 6 | 163 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-43 | 6 | 163 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-43 | 6 | 163 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-43 | 6 | 163 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-43 | 6 | 163 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that binds specific DNA sequences on the promoter regions of target genes. {ECO:0000250|UniProtKB:Q9C8W9}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00583 | DAP | Transfer from AT5G64060 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0550s0150.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011022982.1 | 0.0 | PREDICTED: NAC domain-containing protein 72-like | ||||
Swissprot | Q9FY82 | 8e-90 | NAC82_ARATH; NAC domain-containing protein 82 | ||||
TrEMBL | A0A2K1ZSL4 | 0.0 | A0A2K1ZSL4_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0007s03840.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 2e-88 | NAC domain containing protein 103 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0550s0150.4.p |
Publications ? help Back to Top | |||
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