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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0530s0010.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22617.4 Da PI: 8.3451 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20 | 1.3e-06 | 171 | 197 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR +iN+++ L++++P + SapurV1A.0530s0010.2.p 171 SHSLAERVRRGKINERLRCLQDIVPGC 197 8************************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.58E-4 | 165 | 199 | No hit | No description |
SuperFamily | SSF47459 | 1.96E-7 | 165 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 11.28 | 167 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.0E-7 | 170 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MIEKKQNLMA DFTADLQSFN PPFPFLDIDA SMVAINHFTD VNQAVQLDNP IVNNFHSFTP 60 FTCDNFFSHQ APEFPGSLAE NVLPGSYHQN VMPVSQTLIS PGKESEFQES KKRRAMDVSE 120 SSCMNSSPQV SESGSKKRKS SRRGKRVKNN EEEETKEVVH VRARRGQATD SHSLAERVRR 180 GKINERLRCL QDIVPGCYKV * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0530s0010.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006374179.2 | 1e-115 | transcription factor BEE 3 | ||||
TrEMBL | A0A2K1XHY7 | 1e-113 | A0A2K1XHY7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0012s05210.1 | 5e-98 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73830.1 | 6e-25 | BR enhanced expression 3 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0530s0010.2.p |