PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0423s0140.4.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 202aa    MW: 22180.6 Da    PI: 7.5988
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0423s0140.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.47.6e-1225875128
                     NAM  75 nratksgyWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                             +r +k gyW+ +gk ++v++   +++++g+++ +vfy+g +a+++++t Wv+ ey+l
  SapurV1A.0423s0140.4.p   2 RREAKGGYWRRSGKVRDVVVGpgGKAVMGTRTRFVFYSGnSAKSAVRTGWVLYEYAL 58 
                             68899**************99878888**********986788899*********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.323174IPR003441NAC domain
SuperFamilySSF1019412.88E-16274IPR003441NAC domain
PfamPF023659.8E-6358IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MRREAKGGYW RRSGKVRDVV VGPGGKAVMG TRTRFVFYSG NSAKSAVRTG WVLYEYALVD  60
HAKASFVLCR VFVKSRGGNS ISENVVSSCA EESVSAVRTN GAHHDGFLTP DIAEAKVHDD  120
HVNMQNDLSR YSARLGRDFD DQVTTRPTSI SSFQFPSNSQ CNEVRRTSGP TDGNMHVDAE  180
TAQQLRSILE GDYIELNDLV D*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0423s0140.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011029570.11e-114PREDICTED: NAC transcription factor 29-like
TrEMBLA0A1L6K5G31e-111A0A1L6K5G3_POPTO; Uncharacterized protein
STRINGPOPTR_0014s02580.11e-112(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.26e-12NAC domain containing protein 80