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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
SapurV1A.0379s0100.2.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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| Family |
GATA |
| Protein Properties |
Length: 330aa MW: 36697.8 Da PI: 7.1806 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0379s0100.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 56.8 | 3e-18 | 248 | 281 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs+C++ kTp+WR gp g ktLCnaCG++y++ +
SapurV1A.0379s0100.2.p 248 CSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 281
*******************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MEFRMEARAL KSSLRGELET ESTSQQDFSE DFLVFNTPSV VSSDQDFSVD CFLDFSNGEF 60
KDGYVQEEEE EKDSISVSSQ DRVDDDFNSN SSSFSDSFLA SELAVPSDDI AELEWVSHFV 120
DDSVSDVSLL VPAFKGSPKR HANNRLEPET KPTFAKTPCF FPSRVPSKAR TKRSGHASRT 180
WSAGPNRSET PSSSTSSTSS MPCLVATNMV QTADSLSWLS EQPMKKTKKR PAVHTRGLMA 240
STQFQRRCSH CQVQKTPQWR TGPLGAKTLC NACGVRYKSG RLFPEYRPAC SPTFSSEVHS 300
NSHRKVVEMR RKKEVAGAEP RLSHMVPSF*
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