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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
SapurV1A.0291s0020.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
| Family |
GATA |
| Protein Properties |
Length: 383aa MW: 42071.1 Da PI: 6.4618 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0291s0020.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55 | 1.1e-17 | 269 | 303 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR gp g+ktLCnaCG++y++ +l
SapurV1A.0291s0020.1.p 269 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 303
99*****************************9885 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MEAPEFYGAT GFCSAQFTSN EKHHSLDSNN KSIGVGDHFI VEDLLDFSNE DDDAMVADPN 60
NNNTIVAAAA NSTDSSTVTV VDSCNSSSFS GREPSSFNGD NGSHYTNNFS HHDVHFGSEL 120
CVPYDDLAEL EWLSNFVEES FSSEDLQRLQ LISGMKARPE ESSKSRHFQT HGNTDDNNNG 180
DVSNISNING TMFNPETAVP AKARSKRSRA APGNWASRLL VLSPSTSSSE TEIIAGPTPY 240
PSSGKKTIKG EAGPKKRDGG AEGCDGRRCL HCATDKTPQW RTGPMGPKTL CNACGVRYKS 300
GRLVPEYRPA ASPTFVLTKH SNSHRKVLEL RRQKEMTRAQ QQHQHQQFLH HHQNMVFDVS 360
NGGDDYLIHQ HVGPDFRQMI QQ*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). Transcription activator involved in xylem formation. Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867). {ECO:0000250|UniProtKB:Q8LAU9, ECO:0000269|PubMed:25265867}. |
