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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SapurV1A.0247s0170.8.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
| Family |
AP2 |
| Protein Properties |
Length: 448aa MW: 49373.2 Da PI: 8.2576 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0247s0170.8.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 32.3 | 2.6e-10 | 161 | 192 | 1 | 37 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfg 37
s+y+GV++++++grW+++I+d + k+++lg+f
SapurV1A.0247s0170.8.p 161 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGNFK 192
78*******************......55******995 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 448 aa
Download sequence Send
to blast |
MLDLNLTAVS GDSSTTVKRN NNSNKKILEL SNSPMESSGS FNSSSVVNAD GCGDEDSCSN 60
GEVFALNFSI LANESSSKKT VYSNNNDDDH SDRGDRTIQL FPVECGTKNA GGGSTSSPAV 120
QMQRMDLGGS LNYGVPPEQG IGAQQQKPVK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW 180
DCGKQVYLGN FKIILFVYLK LTLIHWCYGV QLILANLVFI YFVNLGVWFL VGGFDTAHAA 240
ARAYDRAAIK FRGVDADINF NVSDYDEDIK QMSNFTKEEF VHILRRQSTG FSRGSSKYRG 300
VTLHKCGRWE ARMGQFLGKK AYDKAAIKCN GREAVTNFEP STYEVEMLSE PNSGVTYTDG 360
NQNLDLNLGI APPDTSDILK VNSNVGGFYF HSGWDGVSTD RAPKFLNSGS ATMKNQLPNG 420
PGVTSVHPPP MWDGLNHRVF PIYEVIQ*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
