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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.0237s0250.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
WRKY |
Protein Properties |
Length: 343aa MW: 38408.3 Da PI: 5.0922 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.0237s0250.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 92.9 | 2.4e-29 | 131 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDgy+WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs+edp+++eitY+g+H++
SapurV1A.0237s0250.1.p 131 DDGYSWRKYGQKDILGAKYPRSYYRCTYRntqNCWATKQVQRSDEDPTIFEITYRGTHTCA 191
8***************************98899*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MESGWLWEQK TLITELIQGM ELAKQLRTHL NATSSVESRD ELVQRILASY EKALLILSWG 60 RSMGQPQSVG VSAGVPESPI SINGSPRSDE FDGGVKDNQG YNEGSKKRKT APRWTDHVRV 120 SPENGLEGPH DDGYSWRKYG QKDILGAKYP RSYYRCTYRN TQNCWATKQV QRSDEDPTIF 180 EITYRGTHTC AHGNQSIPSP SSPEKQEKKQ KNTINNYQQQ QSQQALYNFQ NSLKVITEDL 240 DNKEMVSPFS FPSAYGCTEN VGSYSPSFIS PATPEPAHYS VSPFQINNFL GAHDSQHLEQ 300 DFAEIISANT SATNSPIVDL DFALDQVELD PNFPFDTPGF FS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GQ377441 | 0.0 | GQ377441.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 21 mRNA, complete cds. |