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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
SapurV1A.0209s0320.4.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
| Family |
AP2 |
| Protein Properties |
Length: 369aa MW: 40739.1 Da PI: 7.4991 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0209s0320.4.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 51.5 | 2.5e-16 | 159 | 208 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+ +++a+ k++g
SapurV1A.0209s0320.4.p 159 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARVYDRAAIKFRG 208
78*******************......55*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MLDLNLIAAA GDSSRTRKSN KLKQKKILEL SNSPVESSGS FDSSSIVNAD GHGDEDSCSN 60
GDVFAFNFSV LSNEISFKKT VDCDSNDEDD GSGDGTIQLF PVACGIENVG GESRSSSTMQ 120
TQWSGLGERW DQGSHPEPGI VAQQKPVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC 180
GKQVYLGGFD TAHAAARVYD RAAIKFRGAD ADINFNVTDY DGDIKQMRNF TKEEFVHILR 240
RRSTGFSRGT SKYRGVTLHK CGRWEARMGQ FLGKKAYDKA AIKCNGREAV TNFEPSTYEG 300
EILSEPHNGD NDQNLDLNLG IAPPDTSDGP KVDSNMGGFY FQSGWDDISF DRAPKVTVKS 360
MLVFLRPK*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
