PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0181s0020.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 299aa    MW: 31435.7 Da    PI: 5.8736
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0181s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822128.96e-40211336149
                  DUF822  36 qGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpsp 122
                             +Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e++++ g sasasp+ss++        +sp++sy++sp+sssfpsp
  SapurV1A.0181s0020.1.p   2 YGNFKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDILGGSASASPCSSYH--------QSPCASYNPSPASSSFPSP 80 
                             8***********************************************************........99****************9 PP

                  DUF822 123 ssldsislasa......asllpvlsvlslvsss 149
                             +s+  + + +       +sl+p+l++ls+ sss
  SapurV1A.0181s0020.1.p  81 VSSRYAANGNGngnpdaNSLIPWLRNLSSGSSS 113
                             998877665547889999*********997776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.4E-441108IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MYGNFKLPKH CDNNEVLKAL CNEAGWTVEE DGTTYRKGCK PVERMDILGG SASASPCSSY  60
HQSPCASYNP SPASSSFPSP VSSRYAANGN GNGNPDANSL IPWLRNLSSG SSSASPKHPH  120
HLFIHTGSIS APVTPPLSSP TARTARTRND WDDPAAGQSW MGQNYSFLPS SMPSSTPPSP  180
GRQVLPDSGW LAGIQTPLSG PSSPTFSLVS RNPFGFKEEA LSGAGSRMWT PGQSGTCSPA  240
VPAGMDQTAD IPMSDSMAAE FAFGSNAVGL VKPWEGERIH EECVSDDLEL TLGNSNTR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-17342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-17342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-17342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-17342404443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0181s0020.1.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU8236020.0EU823602.1 Populus tremula isolate swl195-31 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236030.0EU823603.1 Populus tremula isolate swl195-31 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236040.0EU823604.1 Populus tremula isolate swl195-43 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236160.0EU823616.1 Populus tremula isolate swl195-85 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236200.0EU823620.1 Populus tremula isolate swl195-104 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236290.0EU823629.1 Populus tremula isolate swl195-63E brassinosteroid signaling positive regulator-related protein gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024467344.10.0BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_024467345.10.0BES1/BZR1 homolog protein 4 isoform X2
SwissprotQ9ZV881e-125BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2K1YGT60.0A0A2K1YGT6_POPTR; Uncharacterized protein
STRINGPOPTR_0004s06100.11e-174(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-104BES1/BZR1 homolog 4